Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC098831.1-202ENST00000438821 336 ntBASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 AC136632.2-201ENST00000512891 861 ntBASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 AC005593.1-201ENST00000624894 515 ntBASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRCH1Q9Y2L9 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC090505.1-201ENST00000430515 1834 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 KRT18P27-201ENST00000427733 1299 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 RPL13AP23-201ENST00000480739 586 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC022447.6-201ENST00000515522 438 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 IGHV3-22-201ENST00000520721 359 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC012640.2-201ENST00000561606 901 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC145285.3-201ENST00000564603 959 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC106730.1-201ENST00000566722 1090 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AL356488.2-201ENST00000602755 427 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PI4KAP1-204ENST00000612579 1703 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 TCAM1P-207ENST00000485295 1537 ntBASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.45□□□□□ -0.1
LRCH1Q9Y2L9 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AL731571.1-201ENST00000617058 5428 ntBASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms