Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AC026320.2-201ENST00000434379 478 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 RPL18AP3-201ENST00000462885 528 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 MIR4522-201ENST00000584932 87 ntBASIC21.9■■□□□ 1.1
SHANK2Q9UPX8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SHANK2Q9UPX8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AC092580.1-201ENST00000433998 658 ntBASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AL031713.1-201ENST00000564813 661 ntBASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SHANK2Q9UPX8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 AC010234.1-201ENST00000494599 870 ntBASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 MIR6769A-201ENST00000617340 73 ntBASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 AC008894.3-201ENST00000624324 3103 ntBASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC21.88■■□□□ 1.09
SHANK2Q9UPX8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 BANF1P3-201ENST00000412556 261 ntBASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 RN7SL81P-201ENST00000493781 261 ntBASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 KRT18P9-201ENST00000604826 1300 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms