Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC139712.1-201ENST00000378256 1875 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC006335.1-201ENST00000445200 547 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 SCARNA21-201ENST00000517026 139 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC024681.1-201ENST00000521917 487 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC005962.1-201ENST00000584100 773 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AP001505.2-201ENST00000616815 443 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC091544.8-201ENST00000619490 361 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC133540.1-201ENST00000620845 1019 ntBASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.17■□□□□ 0.34
SYNPO2Q9UMS6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 AC144522.1-201ENST00000625111 1658 ntBASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 KRT8P28-201ENST00000433288 1390 ntBASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 AC013268.4-201ENST00000637413 2228 ntBASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 AL596276.2-201ENST00000447525 331 ntBASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 AC068587.10-201ENST00000641210 219 ntBASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPO2Q9UMS6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 RCC2P8-201ENST00000502779 1035 ntBASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
SYNPO2Q9UMS6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms