Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AC004461.1-201ENST00000412461 403 ntBASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AL627223.1-201ENST00000416693 442 ntBASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RBPMS2P1-201ENST00000437762 623 ntBASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RN7SL828P-201ENST00000607615 303 ntBASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 AL133215.2-201ENST00000609242 977 ntBASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 AL365209.1-201ENST00000624418 6473 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 LILRP1-201ENST00000444199 1370 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 KRT8P12-202ENST00000472924 1397 ntBASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIMS3Q9UJD0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 AC073548.1-201ENST00000624088 1882 ntBASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RIMS3Q9UJD0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms