Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 FAM8A4P-201ENST00000435433 1213 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 Z93015.1-201ENST00000451718 390 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AC108725.1-201ENST00000495472 409 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 PPT1-215ENST00000641471 2368 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 FAM45BP-202ENST00000592932 1624 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CLUHP2-201ENST00000426660 1303 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MIR326-201ENST00000362220 95 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CNN2P10-201ENST00000443067 918 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 COX5BP1-201ENST00000507622 393 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CICP14-201ENST00000629111 2732 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSFQ9UBX1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.23□□□□□ -0.13
CTSFQ9UBX1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms