Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 FAM8A2P-201ENST00000528813 1142 ntBASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 AC005695.3-201ENST00000614522 232 ntBASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLCF1Q9UBD9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AP000593.2-201ENST00000542775 1433 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AL136309.1-201ENST00000403917 691 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AL591846.1-201ENST00000451736 433 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms