Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 RPL8P2-201ENST00000430538 502 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 ALG1L13P-202ENST00000519320 584 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AP003398.1-201ENST00000531124 318 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AL022344.2-201ENST00000568976 968 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AC007881.3-201ENST00000608897 607 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 FO393412.1-201ENST00000619841 382 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 AL132780.4-201ENST00000624870 1135 ntBASIC14.96□□□□□ -0.01
NCDNQ9UBB6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCDNQ9UBB6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCDNQ9UBB6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NCDNQ9UBB6 AL365203.3-201ENST00000609742 2057 ntBASIC14.96□□□□□ -0.02
NCDNQ9UBB6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCDNQ9UBB6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
NCDNQ9UBB6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
NCDNQ9UBB6 AL158070.2-201ENST00000623713 1621 ntBASIC14.95□□□□□ -0.02
NCDNQ9UBB6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 RN7SL67P-201ENST00000492147 296 ntBASIC14.95□□□□□ -0.02
NCDNQ9UBB6 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SNORD3B-2-202ENST00000571722 791 ntBASIC14.95□□□□□ -0.02
NCDNQ9UBB6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 FAM90A2P-201ENST00000511144 1395 ntBASIC14.95□□□□□ -0.02
NCDNQ9UBB6 FAM90A25P-201ENST00000528404 1395 ntBASIC14.95□□□□□ -0.02
NCDNQ9UBB6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
NCDNQ9UBB6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 AL596257.1-201ENST00000641463 2694 ntBASIC14.94□□□□□ -0.02
NCDNQ9UBB6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.94□□□□□ -0.02
NCDNQ9UBB6 AC008723.1-201ENST00000506922 207 ntBASIC14.94□□□□□ -0.02
NCDNQ9UBB6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms