Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20BQ9P0W2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 RN7SL713P-201ENST00000582127 302 ntBASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20BQ9P0W2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20BQ9P0W2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 AL023775.1-201ENST00000454907 1746 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 Z93015.1-201ENST00000451718 390 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 RPSAP36-202ENST00000494591 1261 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 FTLP10-202ENST00000505798 471 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 MIR4525-201ENST00000580000 75 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms