Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TLE1P1-201ENST00000422965 589 ntBASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC007969.1-201ENST00000433675 447 ntBASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC078819.1-201ENST00000547454 765 ntBASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC012085.1-201ENST00000548270 765 ntBASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 PDIA3P1-201ENST00000471856 1510 ntBASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 RN7SKP230-201ENST00000365642 335 ntBASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AP000812.2-201ENST00000538934 718 ntBASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AL512343.1-201ENST00000605837 169 ntBASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AL390755.1-201ENST00000623716 2027 ntBASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.35■□□□□ 0.53
ECHDC1Q9NTX5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 FTLP10-202ENST00000505798 471 ntBASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 RAB43P1-201ENST00000561790 589 ntBASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 AC138696.2-201ENST00000607376 223 ntBASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 SALL4P5-201ENST00000419001 1760 ntBASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC1Q9NTX5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms