Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 PIN1P1-201ENST00000412108 996 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 NUS1P3-201ENST00000423502 862 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 LINC01922-201ENST00000562582 719 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AC093813.1-201ENST00000605066 256 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AC009118.2-201ENST00000613275 655 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.11
NEUROD4Q9HD90 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 RN7SL399P-201ENST00000471648 279 ntBASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AC093004.1-201ENST00000508850 424 ntBASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 MIR6752-201ENST00000618442 71 ntBASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AL158070.2-201ENST00000623713 1621 ntBASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AC018529.2-202ENST00000611482 3087 ntBASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NEUROD4Q9HD90 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC007191.1-201ENST00000623179 2995 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms