Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AL158070.2-201ENST00000623713 1621 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC104457.1-201ENST00000401024 814 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AL512384.1-201ENST00000406683 331 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 INE1-201ENST00000456273 945 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 RN7SL837P-201ENST00000463010 287 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 PTP4A1P2-201ENST00000546033 454 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC005225.4-201ENST00000557330 545 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC010319.3-201ENST00000597028 470 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC012645.4-201ENST00000610691 1061 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC005252.2-201ENST00000624630 1141 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 AC023157.3-201ENST00000619086 2088 ntBASIC13.28□□□□□ -0.28
CDH20Q9HBT6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.28□□□□□ -0.28
CDH20Q9HBT6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDH20Q9HBT6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 TTTY23B-201ENST00000442790 549 ntBASIC13.27□□□□□ -0.29
CDH20Q9HBT6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 AP005019.2-201ENST00000615104 511 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms