Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DPM3-202ENST00000368399 517 ntBASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFCC1Q9HA90 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AL354877.1-201ENST00000424412 413 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AC106794.1-201ENST00000506935 792 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 RN7SL713P-201ENST00000582127 302 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AP001002.3-201ENST00000623482 206 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AL805961.1-203ENST00000641078 1258 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 KRT8P29-201ENST00000420409 1371 ntBASIC17.6■□□□□ 0.41
EFCC1Q9HA90 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFCC1Q9HA90 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms