Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC004854.2-201ENST00000608450 1441 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RNU6-386P-201ENST00000362650 107 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 Y_RNA.67-201ENST00000362870 100 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 Y_RNA.291-201ENST00000364886 113 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RNU6-1200P-201ENST00000384162 107 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RNU6-1026P-201ENST00000384465 108 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RNU6-1222P-201ENST00000384615 107 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC007068.1-201ENST00000396690 844 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RCN1P2-201ENST00000398357 915 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 MIR1305-201ENST00000408300 86 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL139156.2-201ENST00000414059 340 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC25A24P2-201ENST00000415059 510 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RPS7P15-201ENST00000415804 584 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC008073.1-201ENST00000429717 543 ntTSL 4 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC25A24P1-202ENST00000434803 1220 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 TAAR7P-201ENST00000436141 242 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 ARPC3P5-201ENST00000448802 534 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RPL36AP33-201ENST00000450395 310 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AURKAPS1-201ENST00000451805 1212 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 CYCSP20-201ENST00000473154 315 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AP002026.1-203ENST00000506160 524 ntTSL 4 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090071.1-201ENST00000507713 644 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SDHD-203ENST00000526592 861 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL137191.1-201ENST00000554921 814 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC02253-202ENST00000560314 565 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 VN1R65P-201ENST00000566443 808 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL355375.2-201ENST00000574825 175 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC022916.3-201ENST00000592961 742 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 OR7A3P-201ENST00000595284 907 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL356652.1-201ENST00000615962 565 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090971.5-201ENST00000621102 293 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 TMBIM7P-203ENST00000641617 1718 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AC087633.2-202ENST00000565166 1439 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 EFTUD1P2-201ENST00000514817 1603 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 GOLGA2P11-201ENST00000562660 1621 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 AL391994.1-201ENST00000254724 282 ntBASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
KRTAP3-3Q9BYR6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms