Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL035414.1-201ENST00000451327 857 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 RN7SL767P-201ENST00000493013 295 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 TLE2-205ENST00000586422 389 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 FAM223B-202ENST00000598177 713 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 FAM223A-202ENST00000625204 713 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 AC006449.5-201ENST00000610658 2098 ntBASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL25A1Q9BXS0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL25A1Q9BXS0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CROCCP2-202ENST00000412962 2773 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AL590440.2-201ENST00000641973 1595 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CA5BP1-205ENST00000435806 1064 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC139143.1-201ENST00000441772 1207 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 RN7SL340P-201ENST00000470792 296 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 BCAR1P1-201ENST00000553953 636 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 KRT8P2-201ENST00000556193 944 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 AC010335.3-201ENST00000623767 531 ntBASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL25A1Q9BXS0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms