Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC244669.2-201ENST00000612320 853 ntBASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 PRSS30P-206ENST00000641773 873 ntBASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 FO681548.1-201ENST00000455617 1132 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AC119751.2-201ENST00000504529 210 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AP000812.2-201ENST00000538934 718 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 GNRHR2-203ENST00000581100 1187 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 RHOXF1P1-202ENST00000635473 501 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 KRT8P14-201ENST00000414254 1442 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 PPT1-215ENST00000641471 2368 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AC006058.4-201ENST00000624016 1670 ntBASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP3Q9BWW4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CICP11-201ENST00000434745 2827 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms