Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AC005229.1-201ENST00000392885 409 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 KRT17P8-201ENST00000540749 863 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 RAB43P1-201ENST00000561790 589 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 BTNL10-201ENST00000595971 695 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AL022328.1-201ENST00000610050 478 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 CICP20-201ENST00000443330 2801 ntBASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
UPK3BQ9BT76 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC022532.1-201ENST00000624563 1728 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC139749.1-202ENST00000617529 3139 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ARSEP1-201ENST00000420443 635 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 NUS1P3-201ENST00000423502 862 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC234783.1-201ENST00000441761 496 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ATP5G2P4-201ENST00000442175 420 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ACA64.2-201ENST00000459014 129 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 USP32P1-208ENST00000506594 1164 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC068587.3-201ENST00000526613 355 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 TDH-203ENST00000531764 1110 ntBASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC10.61□□□□□ -0.71
UPK3BQ9BT76 AC017083.2-201ENST00000608069 979 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms