Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LITAFQ99732 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 RN7SL850P-201ENST00000579959 291 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 AC117500.6-201ENST00000624871 588 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 AL360270.3-201ENST00000609118 1348 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
LITAFQ99732 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 AL133267.1-201ENST00000398220 340 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 TARDBPP1-201ENST00000442013 1203 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.05□□□□□ -0.8
LITAFQ99732 SAPCD2P3-201ENST00000455031 850 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 AC108751.1-201ENST00000490852 363 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.05□□□□□ -0.8
LITAFQ99732 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.05□□□□□ -0.8
LITAFQ99732 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.05□□□□□ -0.8
LITAFQ99732 AC023141.13-201ENST00000604991 943 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 AC074044.1-201ENST00000609673 707 ntBASIC10.05□□□□□ -0.8
LITAFQ99732 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.05□□□□□ -0.8
LITAFQ99732 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LITAFQ99732 AC011840.2-201ENST00000563063 1520 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms