Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AL360270.3-201ENST00000609118 1348 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC007541.1-201ENST00000570282 1469 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC087499.6-201ENST00000411576 835 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AL353779.1-201ENST00000434793 351 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 BRI3BPP1-201ENST00000594224 787 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 AL132655.2-201ENST00000596276 594 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 INTS4P2-202ENST00000614726 2019 ntBASIC14.4□□□□□ -0.1
BBS4Q96RK4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.4□□□□□ -0.1
BBS4Q96RK4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BBS4Q96RK4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AL391825.1-201ENST00000457671 1364 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AL645937.2-201ENST00000396808 931 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC123567.1-201ENST00000548294 1261 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC120045.2-201ENST00000567334 178 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 BX539320.1-201ENST00000623759 877 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AL158070.2-201ENST00000623713 1621 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms