Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 MROH4P-201ENST00000431302 1578 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AP000845.1-201ENST00000581677 2131 ntBASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PDIA3P1-201ENST00000471856 1510 ntBASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.29□□□□□ -0.12
PTCHD1Q96NR3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTCHD1Q96NR3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms