Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 AC138466.3-201ENST00000619983 221 ntBASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 REXO1L2P-201ENST00000425429 2069 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 AC079178.1-201ENST00000420915 656 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 HSPB1P2-201ENST00000448722 546 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 AC091804.1-201ENST00000486888 567 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 MESTP3-201ENST00000503460 968 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 OR10B1P-201ENST00000601666 907 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 CLUHP2-201ENST00000426660 1303 ntBASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6V0A1Q93050 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC018735.1-201ENST00000437208 1502 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 SLC25A24P2-201ENST00000415059 510 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 POM121L10P-201ENST00000436994 1285 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 SCARNA20.5-201ENST00000516991 142 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 RN7SL713P-201ENST00000582127 302 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PPY2P-201ENST00000582808 702 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC020914.3-201ENST00000594712 304 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC004466.1-201ENST00000599515 1080 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC244157.2-201ENST00000616239 1006 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 AC138028.6-201ENST00000616106 1482 ntBASIC16.86■□□□□ 0.29
ATP6V0A1Q93050 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms