Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF25Q93038 AGGF1P1-201ENST00000509500 2073 ntBASIC17.05■□□□□ 0.32
TNFRSF25Q93038 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 RPL7P3-201ENST00000441388 714 ntBASIC17.04■□□□□ 0.32
TNFRSF25Q93038 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 C2orf69P2-201ENST00000562032 1123 ntBASIC17.04■□□□□ 0.32
TNFRSF25Q93038 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 AC007686.3-201ENST00000619017 3487 ntBASIC17.04■□□□□ 0.32
TNFRSF25Q93038 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF25Q93038 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 AC092135.3-201ENST00000624151 1846 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 MRPL37P1-201ENST00000592451 1337 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 AC004945.1-201ENST00000416738 983 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 AC005034.1-201ENST00000426657 489 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 KRT17P8-201ENST00000540749 863 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 OR10B1P-201ENST00000601666 907 ntBASIC17.03■□□□□ 0.32
TNFRSF25Q93038 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF25Q93038 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 KRT43P-201ENST00000434019 910 ntBASIC17.02■□□□□ 0.32
TNFRSF25Q93038 FAM8A4P-201ENST00000435433 1213 ntBASIC17.02■□□□□ 0.32
TNFRSF25Q93038 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.02■□□□□ 0.32
TNFRSF25Q93038 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms