Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRUNE2Q8WUY3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 PRMT1P1-201ENST00000604252 1009 ntBASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRUNE2Q8WUY3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 DBET-201ENST00000630918 3363 ntBASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AC008825.2-201ENST00000603374 718 ntBASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 MIEF1-215ENST00000637854 213 ntBASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 OR51A9P-201ENST00000422578 911 ntBASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRUNE2Q8WUY3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 CDCA4P4-201ENST00000435216 680 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms