Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC098935.1-201ENST00000446057 611 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC022748.3-201ENST00000621828 275 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AP001002.3-201ENST00000623482 206 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
U2AF1L4Q8WU68 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AC068587.6-202ENST00000641839 5619 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AC092850.2-201ENST00000623821 2697 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AC103702.1-201ENST00000548801 2630 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AL354877.1-201ENST00000424412 413 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 RPL13AP19-201ENST00000434320 584 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AC021723.1-201ENST00000486306 515 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 RN7SL713P-201ENST00000582127 302 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AL023803.2-201ENST00000620080 638 ntBASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
U2AF1L4Q8WU68 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 KRT8P29-201ENST00000420409 1371 ntBASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2AF1L4Q8WU68 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 CICP13-201ENST00000422015 2789 ntBASIC17.26■□□□□ 0.35
U2AF1L4Q8WU68 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms