Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AC013726.1-201ENST00000563747 2285 ntBASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AC099336.1-201ENST00000417053 1171 ntBASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AC016694.1-201ENST00000434179 700 ntBASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 OR2I1P-210ENST00000642037 4691 ntBASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDND2Q8NHS1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ACKR1-201ENST00000368121 1240 ntBASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC022137.2-201ENST00000503482 481 ntBASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 CICP14-201ENST00000629111 2732 ntBASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms