Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 KRT8P31-201ENST00000504812 1408 ntBASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHDC9Q8NEP7 AC013726.1-201ENST00000563747 2285 ntBASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 AC025271.4-201ENST00000621477 1726 ntBASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 RPL18AP3-201ENST00000462885 528 ntBASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 MIR6858-201ENST00000620733 67 ntBASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHDC9Q8NEP7 PCDHA1-201ENST00000378133 2726 ntBASIC16.39■□□□□ 0.22
KLHDC9Q8NEP7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
KLHDC9Q8NEP7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AL807761.2-201ENST00000422849 729 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC097065.1-201ENST00000425737 517 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 MIR6756-201ENST00000616240 63 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC025262.2-201ENST00000623975 1056 ntBASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHDC9Q8NEP7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KLHDC9Q8NEP7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms