Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AL596325.1-201ENST00000563991 1082 ntBASIC13.28□□□□□ -0.28
CPEB3Q8NE35 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC105233.6-201ENST00000642093 218 ntBASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 LILRP1-201ENST00000444199 1370 ntBASIC13.28□□□□□ -0.28
CPEB3Q8NE35 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 AL137783.1-201ENST00000623494 1896 ntBASIC13.27□□□□□ -0.28
CPEB3Q8NE35 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CPEB3Q8NE35 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 ACKR1-201ENST00000368121 1240 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AL139094.1-201ENST00000405549 1188 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AC114812.1-204ENST00000449669 728 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 KRT17P7-201ENST00000451704 1104 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 RN7SL752P-201ENST00000463779 287 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AC005225.4-201ENST00000557330 545 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AP001063.1-201ENST00000568332 529 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AP005019.2-201ENST00000615104 511 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 RPSAP52-203ENST00000622976 1023 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 CU639417.3-201ENST00000624240 1404 ntBASIC13.27□□□□□ -0.29
CPEB3Q8NE35 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPEB3Q8NE35 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms