Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC087499.6-201ENST00000411576 835 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC134915.1-201ENST00000426461 574 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC104596.2-201ENST00000512793 793 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 TP53TG3HP-202ENST00000569755 579 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC140912.1-201ENST00000577171 1054 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AL359881.2-201ENST00000602973 570 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 TMEM261P1-201ENST00000604899 340 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AL645728.2-202ENST00000641679 227 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC010327.5-201ENST00000586923 3061 ntBASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AL158070.2-201ENST00000623713 1621 ntBASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AL008721.1-201ENST00000609964 604 ntBASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC093525.8-201ENST00000624099 1342 ntBASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIMC1Q8NDZ2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 AC107918.4-201ENST00000641966 3141 ntBASIC14.3□□□□□ -0.12
SIMC1Q8NDZ2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms