Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KRT18P9-201ENST00000604826 1300 ntBASIC23■■□□□ 1.27
CFAP43Q8NDM7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 IL9RP3-201ENST00000442856 1674 ntBASIC23■■□□□ 1.27
CFAP43Q8NDM7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 HIST2H2BA-201ENST00000412169 381 ntBASIC23■■□□□ 1.27
CFAP43Q8NDM7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 AC133540.1-201ENST00000620845 1019 ntBASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP43Q8NDM7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 MBP-201ENST00000354542 575 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 BCAS2P2-201ENST00000425064 674 ntBASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 AC136759.1-202ENST00000530858 2194 ntBASIC22.98■■□□□ 1.27
CFAP43Q8NDM7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AC093752.3-201ENST00000567343 901 ntBASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CFAP43Q8NDM7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms