Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SPDYE19P-201ENST00000338590 713 ntBASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AC093004.1-201ENST00000508850 424 ntBASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AL158070.2-201ENST00000623713 1621 ntBASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AL157414.3-201ENST00000624276 1954 ntBASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PMS2P2-201ENST00000425039 1128 ntBASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 HLA-K-203ENST00000430151 1046 ntBASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PRSS30P-206ENST00000641773 873 ntBASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LSMEM1Q8N8F7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms