Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC170Q8IYT3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AL137783.1-201ENST00000623494 1896 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AC093525.8-201ENST00000624099 1342 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AL645937.2-201ENST00000396808 931 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 HLA-K-203ENST00000430151 1046 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AL138828.2-201ENST00000615812 383 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 SPDYE12P-201ENST00000618416 771 ntBASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCDC170Q8IYT3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC170Q8IYT3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 AL137784.3-201ENST00000623858 2288 ntBASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC170Q8IYT3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms