Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 KRT18P32-201ENST00000424695 1287 ntBASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 BX640515.1-201ENST00000617215 977 ntBASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 MST1P2-201ENST00000457982 2291 ntBASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUDCD3Q8IVD9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AC015922.1-201ENST00000421102 1152 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 FAM58DP-201ENST00000428076 619 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 MKNK2P1-201ENST00000437526 628 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 KRT18P43-201ENST00000469825 1281 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AL079307.3-201ENST00000556114 283 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AC040169.1-201ENST00000565382 521 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 AC011474.4-201ENST00000623523 2076 ntBASIC15.08■□□□□ 0
NUDCD3Q8IVD9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NUDCD3Q8IVD9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AL121723.1-201ENST00000445194 1519 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms