Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 AL008707.1-201ENST00000422498 534 ntBASIC16.09■□□□□ 0.17
RNF135Q8IUD6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 RN7SL774P-201ENST00000577467 290 ntBASIC16.09■□□□□ 0.17
RNF135Q8IUD6 AC091544.8-201ENST00000619490 361 ntBASIC16.09■□□□□ 0.17
RNF135Q8IUD6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 TUBBP5-203ENST00000508529 1334 ntBASIC16.09■□□□□ 0.17
RNF135Q8IUD6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF135Q8IUD6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 MIR4313-201ENST00000580760 101 ntBASIC16.08■□□□□ 0.16
RNF135Q8IUD6 RN7SL574P-201ENST00000581512 297 ntBASIC16.08■□□□□ 0.16
RNF135Q8IUD6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 ECM1P1-201ENST00000604092 1279 ntBASIC16.08■□□□□ 0.16
RNF135Q8IUD6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF135Q8IUD6 AC092127.1-201ENST00000567093 3455 ntBASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AC079178.1-201ENST00000420915 656 ntBASIC16.07■□□□□ 0.16
RNF135Q8IUD6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AC097359.3-201ENST00000603982 1210 ntBASIC16.07■□□□□ 0.16
RNF135Q8IUD6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.07■□□□□ 0.16
RNF135Q8IUD6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AL365209.1-201ENST00000624418 6473 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms