Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 SALL4P5-201ENST00000419001 1760 ntBASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AC006486.2-201ENST00000624246 2199 ntBASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AC044849.1-201ENST00000519737 1188 ntBASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE3BQ7Z3V4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 SHC1P1-201ENST00000425230 1745 ntBASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ZBED1P1-201ENST00000502364 1930 ntBASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 NKAIN1P1-201ENST00000435754 582 ntBASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AC009955.4-201ENST00000597192 544 ntBASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 E2F3P2-201ENST00000447755 1422 ntBASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms