Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 AC073869.2-201ENST00000417338 1026 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 ERP29P1-201ENST00000442902 706 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 RN7SL277P-201ENST00000481521 288 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 RPL18AP8-201ENST00000486071 528 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 AC095040.1-201ENST00000513286 675 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 AC010632.2-201ENST00000588369 1224 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 LTB4R2-202ENST00000528054 3092 ntBASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTF1AQ7RTS3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AC140113.1-201ENST00000603467 169 ntBASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AHCYP4-201ENST00000419201 1315 ntBASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTF1AQ7RTS3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 AC004554.1-201ENST00000422830 1468 ntBASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.9■□□□□ 0.62
PTF1AQ7RTS3 KRT18P46-201ENST00000435568 1279 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms