Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 KRT17P7-201ENST00000451704 1104 ntBASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 CYP2A7P1-201ENST00000595391 815 ntBASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 AL138828.2-201ENST00000615812 383 ntBASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXR1Q6PIV2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ACE3P-201ENST00000423435 1973 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 OR8S1-201ENST00000310194 1080 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AC105233.2-201ENST00000523697 349 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AF228730.5-201ENST00000530288 346 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AC007967.4-201ENST00000614700 386 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 AC127383.1-201ENST00000444697 1800 ntBASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXR1Q6PIV2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 AL596325.1-201ENST00000563991 1082 ntBASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 MIR3909-201ENST00000579518 119 ntBASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms