Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 GOLGA8DP-202ENST00000341390 2184 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AL354989.2-201ENST00000435838 1540 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AC012508.2-201ENST00000567613 1472 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CICP4-201ENST00000447359 2812 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 Z93015.1-201ENST00000451718 390 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3F3CQ6NXT2 REXO1L5P-201ENST00000622260 2098 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 CICP11-201ENST00000434745 2827 ntBASIC14□□□□□ -0.17
H3F3CQ6NXT2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3CQ6NXT2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 AC055811.4-201ENST00000624039 1754 ntBASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3CQ6NXT2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms