Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 RNU1-114P-201ENST00000365297 166 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AL162726.2-201ENST00000438986 1017 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 TERF1P3-201ENST00000505638 1227 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AC022616.1-201ENST00000518688 554 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AC008494.3-201ENST00000606615 944 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 LINC00552-201ENST00000625151 2579 ntBASIC18.09■□□□□ 0.49
RNF20Q5VTR2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RNF20Q5VTR2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF20Q5VTR2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 KLF2P2-201ENST00000416807 1039 ntBASIC18.08■□□□□ 0.48
RNF20Q5VTR2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 DUX4L47-201ENST00000566374 394 ntBASIC18.08■□□□□ 0.48
RNF20Q5VTR2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.08■□□□□ 0.48
RNF20Q5VTR2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF20Q5VTR2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms