Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 C8orf49-201ENST00000525043 1968 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AC018665.1-201ENST00000622927 1362 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 OR8S1-201ENST00000310194 1080 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 GK-202ENST00000378941 458 ntTSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AC234783.1-201ENST00000441761 496 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AC007191.1-201ENST00000623179 2995 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 AL365209.1-201ENST00000624418 6473 ntBASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TTC39BQ5VTQ0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 ACTBP8-201ENST00000403258 1108 ntBASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 AL603764.1-201ENST00000636452 321 ntBASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TTC39BQ5VTQ0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms