Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AC098614.1-201ENST00000368528 745 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AP006294.1-201ENST00000415407 339 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 TLE1P1-201ENST00000422965 589 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 TPT1P11-201ENST00000458482 498 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 MESTP3-201ENST00000503460 968 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AP001889.1-201ENST00000525414 633 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AP005018.1-201ENST00000525475 301 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 TDH-203ENST00000531764 1110 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CLUHP2-201ENST00000426660 1303 ntBASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO1Q2MKA7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.02□□□□□ -0.32
RSPO1Q2MKA7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AC007969.1-201ENST00000433675 447 ntBASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AC068587.3-201ENST00000526613 355 ntBASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 PTP4A1P2-201ENST00000546033 454 ntBASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AL596325.1-201ENST00000563991 1082 ntBASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 GNRHR2-203ENST00000581100 1187 ntBASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO1Q2MKA7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms