Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.6■□□□□ 0.73
COL16A1Q07092 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.6■□□□□ 0.73
COL16A1Q07092 AC079414.2-201ENST00000567157 1104 ntBASIC19.6■□□□□ 0.73
COL16A1Q07092 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.6■□□□□ 0.73
COL16A1Q07092 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.6■□□□□ 0.73
COL16A1Q07092 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.6■□□□□ 0.73
COL16A1Q07092 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 AL365181.1-201ENST00000564032 1828 ntBASIC19.6■□□□□ 0.73
COL16A1Q07092 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 AC024909.3-201ENST00000611513 2257 ntBASIC19.59■□□□□ 0.73
COL16A1Q07092 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
COL16A1Q07092 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.59■□□□□ 0.73
COL16A1Q07092 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.59■□□□□ 0.73
COL16A1Q07092 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 GGTLC4P-201ENST00000402176 664 ntBASIC19.59■□□□□ 0.73
COL16A1Q07092 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 AC090820.1-201ENST00000519722 591 ntBASIC19.59■□□□□ 0.73
COL16A1Q07092 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.59■□□□□ 0.73
COL16A1Q07092 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.59■□□□□ 0.73
COL16A1Q07092 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.59■□□□□ 0.73
COL16A1Q07092 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL16A1Q07092 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC19.58■□□□□ 0.73
COL16A1Q07092 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 CSTP2-201ENST00000610599 398 ntBASIC19.58■□□□□ 0.73
COL16A1Q07092 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL16A1Q07092 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL16A1Q07092 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.58■□□□□ 0.73
COL16A1Q07092 AL603832.2-201ENST00000566195 2125 ntBASIC19.58■□□□□ 0.72
COL16A1Q07092 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
COL16A1Q07092 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COL16A1Q07092 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL16A1Q07092 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 OR52M2P-201ENST00000414298 959 ntBASIC19.58■□□□□ 0.72
COL16A1Q07092 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.58■□□□□ 0.72
COL16A1Q07092 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC19.58■□□□□ 0.72
COL16A1Q07092 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.58■□□□□ 0.72
COL16A1Q07092 HNRNPA1P5-201ENST00000558213 966 ntBASIC19.58■□□□□ 0.72
COL16A1Q07092 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.58■□□□□ 0.72
COL16A1Q07092 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL16A1Q07092 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
COL16A1Q07092 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 AC067931.2-201ENST00000623655 2003 ntBASIC19.57■□□□□ 0.72
COL16A1Q07092 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.57■□□□□ 0.72
COL16A1Q07092 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL16A1Q07092 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COL16A1Q07092 AC092903.1-201ENST00000466506 262 ntBASIC19.57■□□□□ 0.72
COL16A1Q07092 MIR2278-201ENST00000516344 96 ntBASIC19.57■□□□□ 0.72
COL16A1Q07092 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.57■□□□□ 0.72
COL16A1Q07092 RN7SL556P-201ENST00000582856 298 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms