Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AC027612.1-201ENST00000445234 2395 ntBASIC14□□□□□ -0.17
PRKCDQ05655 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKCDQ05655 HNRNPFP1-201ENST00000391730 1133 ntBASIC14□□□□□ -0.17
PRKCDQ05655 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AC109322.1-201ENST00000524499 1264 ntBASIC14□□□□□ -0.17
PRKCDQ05655 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 SNHG9-202ENST00000564014 471 ntBASIC14□□□□□ -0.17
PRKCDQ05655 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14□□□□□ -0.17
PRKCDQ05655 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14□□□□□ -0.17
PRKCDQ05655 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14□□□□□ -0.17
PRKCDQ05655 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCDQ05655 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKCDQ05655 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKCDQ05655 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 AC092865.5-201ENST00000545435 363 ntBASIC13.99□□□□□ -0.17
PRKCDQ05655 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.99□□□□□ -0.17
PRKCDQ05655 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.99□□□□□ -0.17
PRKCDQ05655 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.99□□□□□ -0.17
PRKCDQ05655 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PRKCDQ05655 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
PRKCDQ05655 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.99□□□□□ -0.17
PRKCDQ05655 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.99□□□□□ -0.17
PRKCDQ05655 AC134684.3-201ENST00000641758 218 ntBASIC13.99□□□□□ -0.17
PRKCDQ05655 AL109936.8-201ENST00000641772 604 ntBASIC13.99□□□□□ -0.17
PRKCDQ05655 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.99□□□□□ -0.17
PRKCDQ05655 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRKCDQ05655 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms