Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 FO393414.2-201ENST00000405153 598 ntBASIC15.85■□□□□ 0.13
IRX4P78413 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 CSF2RBP1-201ENST00000447905 391 ntBASIC15.85■□□□□ 0.13
IRX4P78413 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.85■□□□□ 0.13
IRX4P78413 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
IRX4P78413 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.85■□□□□ 0.13
IRX4P78413 AC244093.1-201ENST00000610837 814 ntBASIC15.85■□□□□ 0.13
IRX4P78413 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
IRX4P78413 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.85■□□□□ 0.13
IRX4P78413 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IRX4P78413 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IRX4P78413 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
IRX4P78413 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.84■□□□□ 0.13
IRX4P78413 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
IRX4P78413 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.84■□□□□ 0.13
IRX4P78413 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 HIST3H2BA-201ENST00000436555 524 ntBASIC15.84■□□□□ 0.13
IRX4P78413 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.84■□□□□ 0.13
IRX4P78413 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.84■□□□□ 0.13
IRX4P78413 AC103810.3-201ENST00000583567 96 ntBASIC15.84■□□□□ 0.13
IRX4P78413 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.84■□□□□ 0.13
IRX4P78413 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.84■□□□□ 0.13
IRX4P78413 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
IRX4P78413 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IRX4P78413 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
IRX4P78413 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
IRX4P78413 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
IRX4P78413 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
IRX4P78413 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 AC023908.3-201ENST00000564211 3047 ntBASIC15.83■□□□□ 0.12
IRX4P78413 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
IRX4P78413 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.83■□□□□ 0.12
IRX4P78413 ACTG1P3-201ENST00000431775 1114 ntBASIC15.83■□□□□ 0.12
IRX4P78413 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 RNA5SP412-201ENST00000516234 123 ntBASIC15.83■□□□□ 0.12
IRX4P78413 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.83■□□□□ 0.12
IRX4P78413 TDH-203ENST00000531764 1110 ntBASIC15.83■□□□□ 0.12
IRX4P78413 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IRX4P78413 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms