Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 SLC7A15P-201ENST00000424028 1363 ntBASIC15.33■□□□□ 0.04
PRAMEP78395 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 AL138799.1-201ENST00000448213 1675 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEP78395 AC026410.3-201ENST00000514280 936 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEP78395 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEP78395 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 AC004233.3-201ENST00000607794 1269 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 AC099568.2-201ENST00000609194 695 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEP78395 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 AC005089.1-201ENST00000619486 2241 ntBASIC15.32■□□□□ 0.04
PRAMEP78395 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
PRAMEP78395 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEP78395 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEP78395 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEP78395 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRAMEP78395 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms