Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.76□□□□□ -0.69
RPL39P62891 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.76□□□□□ -0.69
RPL39P62891 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RPL39P62891 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.75□□□□□ -0.69
RPL39P62891 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 AP3S2-216ENST00000617003 1561 ntBASIC10.75□□□□□ -0.69
RPL39P62891 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 MIR346-201ENST00000362234 95 ntBASIC10.75□□□□□ -0.69
RPL39P62891 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 TARDBPP1-201ENST00000442013 1203 ntBASIC10.75□□□□□ -0.69
RPL39P62891 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.75□□□□□ -0.69
RPL39P62891 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.75□□□□□ -0.69
RPL39P62891 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.75□□□□□ -0.69
RPL39P62891 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.75□□□□□ -0.69
RPL39P62891 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.75□□□□□ -0.69
RPL39P62891 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.75□□□□□ -0.69
RPL39P62891 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
RPL39P62891 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RPL39P62891 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.75□□□□□ -0.69
RPL39P62891 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RPL39P62891 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.74□□□□□ -0.69
RPL39P62891 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.74□□□□□ -0.69
RPL39P62891 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms