Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK4P57078 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RIPK4P57078 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.73■□□□□ 0.75
RIPK4P57078 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK4P57078 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RIPK4P57078 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK4P57078 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RIPK4P57078 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 AP006547.1-201ENST00000563435 692 ntBASIC19.72■□□□□ 0.75
RIPK4P57078 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.72■□□□□ 0.75
RIPK4P57078 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.72■□□□□ 0.75
RIPK4P57078 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 AC138696.2-201ENST00000607376 223 ntBASIC19.72■□□□□ 0.75
RIPK4P57078 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 AC003102.2-201ENST00000589195 1469 ntBASIC19.72■□□□□ 0.75
RIPK4P57078 CICP23-201ENST00000605013 2741 ntBASIC19.72■□□□□ 0.75
RIPK4P57078 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 AL138725.1-201ENST00000407347 1314 ntBASIC19.72■□□□□ 0.75
RIPK4P57078 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK4P57078 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK4P57078 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.71■□□□□ 0.75
RIPK4P57078 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RIPK4P57078 REXO1L6P-201ENST00000603433 1515 ntBASIC19.71■□□□□ 0.75
RIPK4P57078 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 AC009093.2-202ENST00000620513 2079 ntBASIC19.71■□□□□ 0.75
RIPK4P57078 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 AP000593.2-201ENST00000542775 1433 ntBASIC19.71■□□□□ 0.75
RIPK4P57078 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.71■□□□□ 0.75
RIPK4P57078 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.71■□□□□ 0.75
RIPK4P57078 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 MIR4741-201ENST00000579822 90 ntBASIC19.71■□□□□ 0.75
RIPK4P57078 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RIPK4P57078 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK4P57078 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RIPK4P57078 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.7■□□□□ 0.74
RIPK4P57078 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms