Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN8P56748 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN8P56748 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN8P56748 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.4□□□□□ -0.11
CLDN8P56748 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CLDN8P56748 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.39□□□□□ -0.11
CLDN8P56748 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN8P56748 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 VDAC1P7-201ENST00000462417 847 ntBASIC14.39□□□□□ -0.11
CLDN8P56748 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 RPL13AP25-201ENST00000484130 612 ntBASIC14.39□□□□□ -0.11
CLDN8P56748 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN8P56748 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN8P56748 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CLDN8P56748 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN8P56748 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN8P56748 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN8P56748 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN8P56748 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN8P56748 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN8P56748 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN8P56748 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CLDN8P56748 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN8P56748 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.38□□□□□ -0.11
CLDN8P56748 DUX4L47-201ENST00000566374 394 ntBASIC14.38□□□□□ -0.11
CLDN8P56748 AC104794.3-201ENST00000566840 1248 ntBASIC14.38□□□□□ -0.11
CLDN8P56748 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.38□□□□□ -0.11
CLDN8P56748 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLDN8P56748 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN8P56748 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN8P56748 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms