Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
WNT3AP56704 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.28■□□□□ 0.04
WNT3AP56704 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.28■□□□□ 0.04
WNT3AP56704 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 AC018665.1-201ENST00000622927 1362 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.28■□□□□ 0.04
WNT3AP56704 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 LINC00552-201ENST00000625151 2579 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
WNT3AP56704 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 BAATP1-201ENST00000412284 1225 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 RN7SL692P-201ENST00000464677 288 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 AP005018.1-201ENST00000525475 301 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.28■□□□□ 0.04
WNT3AP56704 TDH-203ENST00000531764 1110 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.28■□□□□ 0.04
WNT3AP56704 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 AC126755.1-201ENST00000525846 6405 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.28■□□□□ 0.04
WNT3AP56704 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 AC232323.1-201ENST00000540724 2099 ntBASIC15.28■□□□□ 0.04
WNT3AP56704 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 AC134312.5-201ENST00000568031 1313 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.27■□□□□ 0.04
WNT3AP56704 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 AC012441.1-201ENST00000446669 685 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 RN7SL837P-201ENST00000463010 287 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 AC011495.1-201ENST00000498085 584 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
WNT3AP56704 PTP4A1P2-201ENST00000546033 454 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
WNT3AP56704 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
WNT3AP56704 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
WNT3AP56704 AL596325.1-201ENST00000563991 1082 ntBASIC15.27■□□□□ 0.04
WNT3AP56704 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
WNT3AP56704 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
WNT3AP56704 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
WNT3AP56704 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
WNT3AP56704 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
WNT3AP56704 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
WNT3AP56704 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.03
WNT3AP56704 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.27■□□□□ 0.03
WNT3AP56704 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.03
WNT3AP56704 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.27■□□□□ 0.03
WNT3AP56704 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.27■□□□□ 0.03
WNT3AP56704 INTS4P1-203ENST00000641008 3683 ntBASIC15.27■□□□□ 0.03
WNT3AP56704 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
WNT3AP56704 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
WNT3AP56704 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms