Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 AC069120.2-201ENST00000524091 540 ntBASIC14.17□□□□□ -0.14
CDH12P55289 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH12P55289 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH12P55289 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 AL691403.2-201ENST00000618460 490 ntBASIC14.17□□□□□ -0.14
CDH12P55289 AC079781.4-201ENST00000641908 219 ntBASIC14.17□□□□□ -0.14
CDH12P55289 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 AL928921.2-201ENST00000641325 2442 ntBASIC14.17□□□□□ -0.14
CDH12P55289 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 AC136759.1-202ENST00000530858 2194 ntBASIC14.17□□□□□ -0.14
CDH12P55289 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 AC027369.6-201ENST00000525520 931 ntBASIC14.16□□□□□ -0.14
CDH12P55289 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH12P55289 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH12P55289 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH12P55289 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH12P55289 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH12P55289 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH12P55289 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH12P55289 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDH12P55289 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms