Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR658-201ENST00000385210 100 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 MIR1202-201ENST00000408529 83 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 AC099336.1-201ENST00000417053 1171 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 OR10B1P-201ENST00000601666 907 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 MIR6805-201ENST00000615055 62 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 AC008687.7-202ENST00000637404 953 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 CICP24-201ENST00000605464 2705 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 AHCYP2-201ENST00000430630 1300 ntBASIC16.49■□□□□ 0.23
NCKAP1LP55160 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SALL4P5-201ENST00000419001 1760 ntBASIC16.49■□□□□ 0.23
NCKAP1LP55160 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 RN7SKP175-201ENST00000408472 289 ntBASIC16.49■□□□□ 0.23
NCKAP1LP55160 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 KRT223P-202ENST00000449164 1292 ntBASIC16.49■□□□□ 0.23
NCKAP1LP55160 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 CICP14-201ENST00000629111 2732 ntBASIC16.49■□□□□ 0.23
NCKAP1LP55160 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCKAP1LP55160 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCKAP1LP55160 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AC018529.2-202ENST00000611482 3087 ntBASIC16.48■□□□□ 0.23
NCKAP1LP55160 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 CSF2RBP1-201ENST00000447905 391 ntBASIC16.48■□□□□ 0.23
NCKAP1LP55160 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AC073413.1-201ENST00000603927 732 ntBASIC16.48■□□□□ 0.23
NCKAP1LP55160 AC133552.6-201ENST00000613406 534 ntBASIC16.48■□□□□ 0.23
NCKAP1LP55160 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCKAP1LP55160 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NCKAP1LP55160 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms