Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AC020658.6-201ENST00000623564 1870 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 AL596257.1-201ENST00000641463 2694 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CLCN4P51793 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN4P51793 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 AC253536.4-201ENST00000440539 267 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN4P51793 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CLCN4P51793 AC020922.3-201ENST00000595064 547 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 AC132192.2-201ENST00000596206 1147 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN4P51793 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN4P51793 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN4P51793 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 AL359258.3-201ENST00000622910 2331 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 AC022532.1-201ENST00000624563 1728 ntBASIC15.79■□□□□ 0.12
CLCN4P51793 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN4P51793 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN4P51793 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CLCN4P51793 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLCN4P51793 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CLCN4P51793 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 ISCA2P1-201ENST00000425548 448 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 PDIA3P2-201ENST00000428073 158 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 AL353637.1-201ENST00000451571 732 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN4P51793 HLA-J-204ENST00000495278 958 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN4P51793 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN4P51793 AP000346.4-201ENST00000614827 381 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN4P51793 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN4P51793 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN4P51793 AC012508.2-201ENST00000567613 1472 ntBASIC15.78■□□□□ 0.12
CLCN4P51793 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN4P51793 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCN4P51793 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN4P51793 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms